Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.61□□□□□ -0.71
P04940 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.61□□□□□ -0.71
P04940 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
P04940 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
P04940 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.61□□□□□ -0.71
P04940 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.61□□□□□ -0.71
P04940 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.61□□□□□ -0.71
P04940 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.61□□□□□ -0.71
P04940 Gm13123-201ENSMUST00000122173 492 ntBASIC10.61□□□□□ -0.71
P04940 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.61□□□□□ -0.71
P04940 Gm37922-201ENSMUST00000195596 455 ntBASIC10.61□□□□□ -0.71
P04940 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.61□□□□□ -0.71
P04940 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.61□□□□□ -0.71
P04940 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gm5356-201ENSMUST00000093326 615 ntBASIC10.61□□□□□ -0.71
P04940 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
P04940 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.61□□□□□ -0.71
P04940 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
P04940 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.61□□□□□ -0.71
P04940 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.61□□□□□ -0.71
P04940 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
P04940 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
P04940 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
P04940 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.6□□□□□ -0.71
P04940 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.6□□□□□ -0.71
P04940 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.6□□□□□ -0.71
P04940 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.6□□□□□ -0.71
P04940 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Gm11814-201ENSMUST00000119515 929 ntBASIC10.6□□□□□ -0.71
P04940 Gm11803-201ENSMUST00000119966 444 ntBASIC10.6□□□□□ -0.71
P04940 Gm15806-201ENSMUST00000120696 955 ntBASIC10.6□□□□□ -0.71
P04940 Gm12291-201ENSMUST00000121627 311 ntBASIC10.6□□□□□ -0.71
P04940 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.6□□□□□ -0.71
P04940 Gm12138-201ENSMUST00000122180 951 ntBASIC10.6□□□□□ -0.71
P04940 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.6□□□□□ -0.71
P04940 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.6□□□□□ -0.71
P04940 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
P04940 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.6□□□□□ -0.71
P04940 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.6□□□□□ -0.71
P04940 Gm27892-201ENSMUST00000185017 106 ntBASIC10.6□□□□□ -0.71
P04940 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.6□□□□□ -0.71
P04940 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P04940 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.6□□□□□ -0.71
P04940 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms