Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04224 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.5□□□□□ -0.57
P04224 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.5□□□□□ -0.57
P04224 Gm9824-201ENSMUST00000178707 561 ntBASIC11.5□□□□□ -0.57
P04224 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Gm10175-201ENSMUST00000086013 645 ntBASIC11.5□□□□□ -0.57
P04224 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.5□□□□□ -0.57
P04224 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P04224 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
P04224 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.5□□□□□ -0.57
P04224 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P04224 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04224 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.5□□□□□ -0.57
P04224 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P04224 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P04224 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
P04224 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.49□□□□□ -0.57
P04224 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.49□□□□□ -0.57
P04224 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Gm13015-201ENSMUST00000118674 204 ntBASIC11.49□□□□□ -0.57
P04224 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.49□□□□□ -0.57
P04224 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.49□□□□□ -0.57
P04224 Gm18889-201ENSMUST00000174284 929 ntBASIC11.49□□□□□ -0.57
P04224 Gm27494-201ENSMUST00000184735 189 ntBASIC11.49□□□□□ -0.57
P04224 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
P04224 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.49□□□□□ -0.57
P04224 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04224 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
P04224 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.49□□□□□ -0.57
P04224 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.49□□□□□ -0.57
P04224 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
P04224 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P04224 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
P04224 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04224 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
P04224 Mir1895-201ENSMUST00000122615 79 ntBASIC11.48□□□□□ -0.57
P04224 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
P04224 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
P04224 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
P04224 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.48□□□□□ -0.57
P04224 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.48□□□□□ -0.57
P04224 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.48□□□□□ -0.57
P04224 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms