Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.56□□□□□ -0.88
TcraP01849 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
TcraP01849 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.56□□□□□ -0.88
TcraP01849 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.55□□□□□ -0.88
TcraP01849 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.55□□□□□ -0.88
TcraP01849 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.55□□□□□ -0.88
TcraP01849 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 AA543401-201ENSMUST00000164248 1269 ntBASIC9.55□□□□□ -0.88
TcraP01849 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Gm5264-201ENSMUST00000190584 848 ntBASIC9.55□□□□□ -0.88
TcraP01849 Ighv8-7-201ENSMUST00000194349 297 ntBASIC9.55□□□□□ -0.88
TcraP01849 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC9.55□□□□□ -0.88
TcraP01849 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.55□□□□□ -0.88
TcraP01849 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.55□□□□□ -0.88
TcraP01849 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.55□□□□□ -0.88
TcraP01849 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.55□□□□□ -0.88
TcraP01849 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
TcraP01849 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
TcraP01849 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.54□□□□□ -0.88
TcraP01849 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Gm43051-201ENSMUST00000201096 2678 ntBASIC9.54□□□□□ -0.88
TcraP01849 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
TcraP01849 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
TcraP01849 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
TcraP01849 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Gm11779-201ENSMUST00000118541 368 ntBASIC9.54□□□□□ -0.88
TcraP01849 Gm38225-201ENSMUST00000194001 393 ntBASIC9.54□□□□□ -0.88
TcraP01849 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.54□□□□□ -0.88
TcraP01849 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.54□□□□□ -0.88
TcraP01849 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
TcraP01849 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Gm18057-201ENSMUST00000208220 503 ntBASIC9.54□□□□□ -0.88
TcraP01849 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
TcraP01849 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.54□□□□□ -0.88
TcraP01849 Gm18027-201ENSMUST00000218947 619 ntBASIC9.54□□□□□ -0.88
TcraP01849 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms