Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igh-VJ558P01758 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm10156-201ENSMUST00000122364 462 ntBASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm38671-201ENSMUST00000200573 130 ntBASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gm6458-201ENSMUST00000211573 635 ntBASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igh-VJ558P01758 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Gm11618-201ENSMUST00000117946 267 ntBASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.3□□□□□ -0.6
Igh-VJ558P01758 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.3□□□□□ -0.6
Igh-VJ558P01758 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.3□□□□□ -0.6
Igh-VJ558P01758 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igh-VJ558P01758 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms