Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10226O88253 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm10226O88253 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10226O88253 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm10226O88253 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Snord83b-201ENSMUST00000104546 94 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm12291-201ENSMUST00000121627 311 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm10226O88253 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm10226O88253 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm10226O88253 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm6222-202ENSMUST00000182143 629 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm18054-201ENSMUST00000207539 555 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Gm45880-201ENSMUST00000213041 853 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm10226O88253 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Gm10226O88253 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm10226O88253 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.08□□□□□ -0.8
Gm10226O88253 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm10226O88253 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10226O88253 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm10226O88253 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10226O88253 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm18041-201ENSMUST00000218210 618 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.07□□□□□ -0.8
Gm10226O88253 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm10226O88253 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10226O88253 Matn2-206ENSMUST00000228570 2798 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms