Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.66■□□□□ 0.26
Ubr1O70481 Gm10051-201ENSMUST00000145209 414 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Gm7848-201ENSMUST00000210739 718 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Gm45770-201ENSMUST00000212105 616 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ubr1O70481 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Ubr1O70481 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.66■□□□□ 0.26
Ubr1O70481 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.66■□□□□ 0.26
Ubr1O70481 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Gm9996-201ENSMUST00000070359 913 ntBASIC16.66■□□□□ 0.26
Ubr1O70481 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.66■□□□□ 0.26
Ubr1O70481 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.66■□□□□ 0.26
Ubr1O70481 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ubr1O70481 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.66■□□□□ 0.26
Ubr1O70481 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ubr1O70481 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubr1O70481 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Ubr1O70481 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.65■□□□□ 0.26
Ubr1O70481 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Gm14263-201ENSMUST00000117955 746 ntBASIC16.65■□□□□ 0.26
Ubr1O70481 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.65■□□□□ 0.26
Ubr1O70481 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.65■□□□□ 0.26
Ubr1O70481 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.65■□□□□ 0.26
Ubr1O70481 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC16.65■□□□□ 0.26
Ubr1O70481 Gm27530-201ENSMUST00000184096 98 ntBASIC16.65■□□□□ 0.26
Ubr1O70481 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.65■□□□□ 0.26
Ubr1O70481 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubr1O70481 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ubr1O70481 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ubr1O70481 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Ubr1O70481 Gm22902-201ENSMUST00000158488 302 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC16.64■□□□□ 0.25
Ubr1O70481 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.64■□□□□ 0.25
Ubr1O70481 Gm43378-201ENSMUST00000199336 582 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ubr1O70481 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ubr1O70481 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ubr1O70481 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Ubr1O70481 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubr1O70481 Gm23699-201ENSMUST00000158835 135 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 AU022133-201ENSMUST00000200601 873 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.64■□□□□ 0.25
Ubr1O70481 Gm18730-201ENSMUST00000218038 343 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ubr1O70481 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.64■□□□□ 0.25
Ubr1O70481 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubr1O70481 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ubr1O70481 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms