Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.96□□□□□ -0.33
Pdlim1O70400 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Gm43433-201ENSMUST00000196573 481 ntBASIC12.96□□□□□ -0.33
Pdlim1O70400 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdlim1O70400 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.96□□□□□ -0.33
Pdlim1O70400 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pdlim1O70400 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdlim1O70400 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Pdlim1O70400 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdlim1O70400 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.95□□□□□ -0.34
Pdlim1O70400 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Gm8805-201ENSMUST00000117848 313 ntBASIC12.95□□□□□ -0.34
Pdlim1O70400 Gm15824-201ENSMUST00000119516 955 ntBASIC12.95□□□□□ -0.34
Pdlim1O70400 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.95□□□□□ -0.34
Pdlim1O70400 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Pdlim1O70400 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.95□□□□□ -0.34
Pdlim1O70400 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdlim1O70400 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Pdlim1O70400 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.94□□□□□ -0.34
Pdlim1O70400 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Mir686-201ENSMUST00000102174 109 ntBASIC12.94□□□□□ -0.34
Pdlim1O70400 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Gm13369-201ENSMUST00000119442 987 ntBASIC12.94□□□□□ -0.34
Pdlim1O70400 Gm13829-201ENSMUST00000119600 138 ntBASIC12.94□□□□□ -0.34
Pdlim1O70400 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pdlim1O70400 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdlim1O70400 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms