Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Pde6dO55057 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Pde6dO55057 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Pde6dO55057 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.33□□□□□ -0.76
Pde6dO55057 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pde6dO55057 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Pde6dO55057 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.32□□□□□ -0.76
Pde6dO55057 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Pde6dO55057 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.32□□□□□ -0.76
Pde6dO55057 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.32□□□□□ -0.76
Pde6dO55057 Rpph1-201ENSMUST00000175096 319 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Gm27628-201ENSMUST00000184911 107 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm44124-201ENSMUST00000204159 472 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Daam2-202ENSMUST00000224595 1926 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pde6dO55057 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pde6dO55057 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.32□□□□□ -0.76
Pde6dO55057 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.31□□□□□ -0.76
Pde6dO55057 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.31□□□□□ -0.76
Pde6dO55057 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.31□□□□□ -0.76
Pde6dO55057 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pde6dO55057 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pde6dO55057 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.31□□□□□ -0.76
Pde6dO55057 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pde6dO55057 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pde6dO55057 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.31□□□□□ -0.76
Pde6dO55057 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.31□□□□□ -0.76
Pde6dO55057 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Pde6dO55057 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.31□□□□□ -0.76
Pde6dO55057 AC149588.3-201ENSMUST00000227515 150 ntBASIC10.31□□□□□ -0.76
Pde6dO55057 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.31□□□□□ -0.76
Pde6dO55057 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pde6dO55057 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pde6dO55057 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms