Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Npc1O35604 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Gm13226-201ENSMUST00000117838 404 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Snora78-201ENSMUST00000158630 128 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.8□□□□□ -0.36
Npc1O35604 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.8□□□□□ -0.36
Npc1O35604 Gm43818-201ENSMUST00000200605 466 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Npc1O35604 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.8□□□□□ -0.36
Npc1O35604 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Npc1O35604 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Gm12384-201ENSMUST00000119228 919 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Gm11425-201ENSMUST00000119608 498 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 Gm8810-201ENSMUST00000172895 754 ntBASIC12.79□□□□□ -0.36
Npc1O35604 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Npc1O35604 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Gm37922-201ENSMUST00000195596 455 ntBASIC12.79□□□□□ -0.36
Npc1O35604 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Npc1O35604 Gm9396-201ENSMUST00000076703 567 ntBASIC12.79□□□□□ -0.36
Npc1O35604 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.79□□□□□ -0.36
Npc1O35604 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Npc1O35604 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Npc1O35604 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Npc1O35604 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.78□□□□□ -0.36
Npc1O35604 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Npc1O35604 Gm11618-201ENSMUST00000117946 267 ntBASIC12.78□□□□□ -0.36
Npc1O35604 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.78□□□□□ -0.36
Npc1O35604 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.78□□□□□ -0.36
Npc1O35604 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.78□□□□□ -0.36
Npc1O35604 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Npc1O35604 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npc1O35604 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Npc1O35604 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Npc1O35604 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Npc1O35604 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Npc1O35604 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.77□□□□□ -0.36
Npc1O35604 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Npc1O35604 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms