Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Efnb3O35393 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Efnb3O35393 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Efnb3O35393 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Efnb3O35393 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.36□□□□□ -0.75
Efnb3O35393 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.36□□□□□ -0.75
Efnb3O35393 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.36□□□□□ -0.75
Efnb3O35393 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.36□□□□□ -0.75
Efnb3O35393 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Efnb3O35393 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Efnb3O35393 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Efnb3O35393 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.36□□□□□ -0.75
Efnb3O35393 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Efnb3O35393 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.35□□□□□ -0.75
Efnb3O35393 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.35□□□□□ -0.75
Efnb3O35393 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.35□□□□□ -0.75
Efnb3O35393 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Efnb3O35393 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Matn2-203ENSMUST00000226766 3252 ntBASIC10.35□□□□□ -0.75
Efnb3O35393 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Efnb3O35393 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.35□□□□□ -0.75
Efnb3O35393 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.35□□□□□ -0.75
Efnb3O35393 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC10.35□□□□□ -0.75
Efnb3O35393 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Efnb3O35393 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.35□□□□□ -0.75
Efnb3O35393 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.35□□□□□ -0.75
Efnb3O35393 Shd-206ENSMUST00000225145 998 ntBASIC10.35□□□□□ -0.75
Efnb3O35393 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Efnb3O35393 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.35□□□□□ -0.75
Efnb3O35393 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Efnb3O35393 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Efnb3O35393 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.35□□□□□ -0.75
Efnb3O35393 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms