Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Col15a1O35206 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.61■□□□□ 0.25
Col15a1O35206 Gm13315-201ENSMUST00000120376 991 ntBASIC16.61■□□□□ 0.25
Col15a1O35206 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC16.61■□□□□ 0.25
Col15a1O35206 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col15a1O35206 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.61■□□□□ 0.25
Col15a1O35206 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.61■□□□□ 0.25
Col15a1O35206 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.61■□□□□ 0.25
Col15a1O35206 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC16.61■□□□□ 0.25
Col15a1O35206 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.61■□□□□ 0.25
Col15a1O35206 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col15a1O35206 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col15a1O35206 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col15a1O35206 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col15a1O35206 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col15a1O35206 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col15a1O35206 Gm43378-201ENSMUST00000199336 582 ntBASIC16.6■□□□□ 0.25
Col15a1O35206 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Col15a1O35206 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col15a1O35206 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.59■□□□□ 0.25
Col15a1O35206 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.59■□□□□ 0.25
Col15a1O35206 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC16.59■□□□□ 0.25
Col15a1O35206 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.59■□□□□ 0.25
Col15a1O35206 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Col15a1O35206 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col15a1O35206 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.59■□□□□ 0.25
Col15a1O35206 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col15a1O35206 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.58■□□□□ 0.25
Col15a1O35206 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col15a1O35206 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.58■□□□□ 0.24
Col15a1O35206 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Col15a1O35206 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col15a1O35206 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.58■□□□□ 0.24
Col15a1O35206 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col15a1O35206 Gm28882-201ENSMUST00000185504 314 ntBASIC16.58■□□□□ 0.24
Col15a1O35206 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.58■□□□□ 0.24
Col15a1O35206 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 AC131330.1-201ENSMUST00000227814 1015 ntBASIC16.58■□□□□ 0.24
Col15a1O35206 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col15a1O35206 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col15a1O35206 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col15a1O35206 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col15a1O35206 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
Col15a1O35206 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
Col15a1O35206 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.57■□□□□ 0.24
Col15a1O35206 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms