Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Hdac1O09106 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hdac1O09106 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.58■□□□□ 0.09
Hdac1O09106 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.58■□□□□ 0.09
Hdac1O09106 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Hdac1O09106 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Gm22189-201ENSMUST00000103822 86 ntBASIC15.58■□□□□ 0.08
Hdac1O09106 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.58■□□□□ 0.08
Hdac1O09106 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.58■□□□□ 0.08
Hdac1O09106 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Hdac1O09106 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.58■□□□□ 0.08
Hdac1O09106 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Hdac1O09106 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.58■□□□□ 0.08
Hdac1O09106 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Hdac1O09106 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hdac1O09106 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Hdac1O09106 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Hdac1O09106 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Hdac1O09106 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Hdac1O09106 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.57■□□□□ 0.08
Hdac1O09106 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.57■□□□□ 0.08
Hdac1O09106 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Gm27989-201ENSMUST00000184721 107 ntBASIC15.57■□□□□ 0.08
Hdac1O09106 Gm27838-201ENSMUST00000184829 128 ntBASIC15.57■□□□□ 0.08
Hdac1O09106 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.57■□□□□ 0.08
Hdac1O09106 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.57■□□□□ 0.08
Hdac1O09106 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Hdac1O09106 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.56■□□□□ 0.08
Hdac1O09106 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Mir686-201ENSMUST00000102174 109 ntBASIC15.56■□□□□ 0.08
Hdac1O09106 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.56■□□□□ 0.08
Hdac1O09106 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Hdac1O09106 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Hdac1O09106 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Gm38223-201ENSMUST00000194484 695 ntBASIC15.56■□□□□ 0.08
Hdac1O09106 Gm44124-201ENSMUST00000204159 472 ntBASIC15.56■□□□□ 0.08
Hdac1O09106 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Hdac1O09106 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.56■□□□□ 0.08
Hdac1O09106 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.56■□□□□ 0.08
Hdac1O09106 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.56■□□□□ 0.08
Hdac1O09106 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Hdac1O09106 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Hdac1O09106 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Hdac1O09106 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Hdac1O09106 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Hdac1O09106 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms