Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usp35M0QWN7 AC107453.4-201ENSMUST00000227068 1817 ntBASIC14.11□□□□□ -0.15
Usp35M0QWN7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm8213-201ENSMUST00000118191 441 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm5687-201ENSMUST00000118252 640 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Itm2b-204ENSMUST00000228637 783 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp35M0QWN7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Proscos-202ENSMUST00000178990 666 ntBASIC14.09□□□□□ -0.15
Usp35M0QWN7 Gm38144-201ENSMUST00000192790 465 ntBASIC14.09□□□□□ -0.15
Usp35M0QWN7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp35M0QWN7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp35M0QWN7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm10156-201ENSMUST00000122364 462 ntBASIC14.08□□□□□ -0.16
Usp35M0QWN7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp35M0QWN7 Gm8810-201ENSMUST00000172895 754 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms