Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.74■□□□□ 0.11
NpcdF8VQB8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gm13611-201ENSMUST00000118269 318 ntBASIC15.74■□□□□ 0.11
NpcdF8VQB8 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gm9279-201ENSMUST00000223175 1606 ntBASIC15.74■□□□□ 0.11
NpcdF8VQB8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.74■□□□□ 0.11
NpcdF8VQB8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gm12208-201ENSMUST00000122004 163 ntBASIC15.73■□□□□ 0.11
NpcdF8VQB8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gm2546-201ENSMUST00000182630 991 ntBASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gm3096-201ENSMUST00000185770 364 ntBASIC15.73■□□□□ 0.11
NpcdF8VQB8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NpcdF8VQB8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm6335-201ENSMUST00000118081 1194 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm13996-201ENSMUST00000118456 430 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm7816-201ENSMUST00000119884 1194 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm8566-201ENSMUST00000120174 465 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm15542-201ENSMUST00000121585 1194 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm44262-201ENSMUST00000204969 372 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 AC123665.1-201ENSMUST00000228204 438 ntBASIC15.72■□□□□ 0.11
NpcdF8VQB8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NpcdF8VQB8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms