Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm13123-201ENSMUST00000122173 492 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm7029-201ENSMUST00000173226 450 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm37008-201ENSMUST00000195712 319 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm44069-201ENSMUST00000204898 506 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm9823-201ENSMUST00000051212 327 ntBASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh17E9PXF0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Mir686-201ENSMUST00000102174 109 ntBASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Gm6447-201ENSMUST00000118905 835 ntBASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh17E9PXF0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh17E9PXF0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdh17E9PXF0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms