Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.91□□□□□ -0.34
Srp54bE9PXC0 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Srp54bE9PXC0 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm17208-201ENSMUST00000168388 535 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm3890-201ENSMUST00000182416 207 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm37042-201ENSMUST00000193816 581 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm43758-201ENSMUST00000199500 367 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm6334-201ENSMUST00000207083 228 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Cts7-204ENSMUST00000225321 1257 ntBASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Srp54bE9PXC0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Srp54bE9PXC0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Srp54bE9PXC0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Srp54bE9PXC0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Srp54bE9PXC0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms