Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm24398-201ENSMUST00000157870 109 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a3E9PWQ3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gm14724-201ENSMUST00000118400 537 ntBASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gm12663-201ENSMUST00000118481 958 ntBASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gm10288-201ENSMUST00000084614 537 ntBASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a3E9PWQ3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Gm12986-201ENSMUST00000119037 967 ntBASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Gm12736-201ENSMUST00000119330 236 ntBASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col6a3E9PWQ3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm8100-201ENSMUST00000182906 988 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm22133-201ENSMUST00000102082 109 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm11619-201ENSMUST00000117474 237 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.7□□□□□ -0.38
Col6a3E9PWQ3 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms