Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm28043E0CXC2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm16215-201ENSMUST00000161990 637 ntBASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm7730-201ENSMUST00000212486 454 ntBASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.15□□□□□ -0.3
Gm28043E0CXC2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Gm28043E0CXC2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.14□□□□□ -0.31
Gm28043E0CXC2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Gm27437-201ENSMUST00000183429 107 ntBASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Mir6977-201ENSMUST00000184960 64 ntBASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm28043E0CXC2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.13□□□□□ -0.31
Gm28043E0CXC2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms