Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Scn7aB1AYL1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn7aB1AYL1 Gm23949-201ENSMUST00000104027 127 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Mir6546-201ENSMUST00000184460 62 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 AC154276.3-201ENSMUST00000227643 998 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm26035-201ENSMUST00000083065 308 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm12196-201ENSMUST00000120954 262 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm14760-201ENSMUST00000121831 999 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm20426-201ENSMUST00000173657 440 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Spcs1-203ENSMUST00000226374 592 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Ntng1-201ENSMUST00000051253 327 ntBASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn7aB1AYL1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm29615-201ENSMUST00000185371 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28224-201ENSMUST00000186078 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm29001-201ENSMUST00000186177 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28292-201ENSMUST00000186593 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28101-201ENSMUST00000187608 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm29076-201ENSMUST00000187689 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28302-201ENSMUST00000187931 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28646-201ENSMUST00000188220 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28205-201ENSMUST00000189177 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm29032-201ENSMUST00000189797 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm28695-201ENSMUST00000190300 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Gm37448-201ENSMUST00000192795 697 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.49■□□□□ 0.23
Scn7aB1AYL1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn7aB1AYL1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Gm24514-201ENSMUST00000174961 285 ntBASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Sybu-209ENSMUST00000228639 4113 ntBASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn7aB1AYL1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms