Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Gm12428-201ENSMUST00000119844 727 ntBASIC10.58□□□□□ -0.72
Gm12887B1AVM1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Gm12887B1AVM1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.57□□□□□ -0.72
Gm12887B1AVM1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Gm12887B1AVM1 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Gm12887B1AVM1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms