Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm25881-201ENSMUST00000157783 103 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.5□□□□□ -0.73
Chd6A3KFM7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Chd6A3KFM7 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm44980-201ENSMUST00000205826 314 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm24791-201ENSMUST00000104284 131 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm13809-201ENSMUST00000117921 597 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm22442-201ENSMUST00000157256 144 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 BC106175-202ENSMUST00000219344 1213 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm20694-201ENSMUST00000176943 404 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Gm37299-201ENSMUST00000193951 826 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.49□□□□□ -0.73
Chd6A3KFM7 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Chd6A3KFM7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm7722-201ENSMUST00000120646 741 ntBASIC10.48□□□□□ -0.73
Chd6A3KFM7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm22146-201ENSMUST00000157397 288 ntBASIC10.48□□□□□ -0.73
Chd6A3KFM7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm6485-201ENSMUST00000160676 439 ntBASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm22058-201ENSMUST00000083393 310 ntBASIC10.48□□□□□ -0.73
Chd6A3KFM7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.48□□□□□ -0.73
Chd6A3KFM7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Chd6A3KFM7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Chd6A3KFM7 AC107763.1-201ENSMUST00000226082 1365 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms