Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Mir8102-201ENSMUST00000184148 139 ntBASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm5425-201ENSMUST00000214125 459 ntBASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav6n-6A0A075B6B2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm9347-201ENSMUST00000211473 1607 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm14057-201ENSMUST00000120631 482 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav6n-6A0A075B6B2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav6n-6A0A075B6B2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms