Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Gm15957-201ENSMUST00000118893 974 ntBASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav8-1A0A075B641 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm27628-201ENSMUST00000184911 107 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ighv8-14-201ENSMUST00000196781 358 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav8-1A0A075B641 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.35□□□□□ -0.91
Trav8-1A0A075B641 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms