Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm14350-201ENSMUST00000116642 640 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm14928-201ENSMUST00000120198 477 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
H2afb2S4R1M3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm23984-201ENSMUST00000157139 203 ntBASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm6180-201ENSMUST00000065243 498 ntBASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm16372-201ENSMUST00000073088 450 ntBASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H2afb2S4R1M3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H2afb2S4R1M3 Gm44069-201ENSMUST00000204898 506 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms