Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afb3S4R1G7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Mir8102-201ENSMUST00000184148 139 ntBASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Gm27838-201ENSMUST00000184829 128 ntBASIC11.84□□□□□ -0.51
H2afb3S4R1G7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afb3S4R1G7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2afb3S4R1G7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm12403-201ENSMUST00000121384 959 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Mir7684-201ENSMUST00000183858 60 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm5279-201ENSMUST00000199575 745 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb3S4R1G7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms