Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Mbd1Q9Z2E2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm15371-201ENSMUST00000117057 784 ntBASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Mbd1Q9Z2E2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Mbd1Q9Z2E2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms