Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Upk1bQ9Z2C6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Gm3436-201ENSMUST00000179930 840 ntBASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk1bQ9Z2C6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1bQ9Z2C6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms