Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.1□□□□□ -0.47
Phf1Q9Z1B8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm13392-201ENSMUST00000117708 150 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm38144-201ENSMUST00000192790 465 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm45331-201ENSMUST00000209868 554 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Phf1Q9Z1B8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Phf1Q9Z1B8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Phf1Q9Z1B8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gm29649-201ENSMUST00000185649 419 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Phf1Q9Z1B8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms