Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn8aQ9WTU3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm10434-201ENSMUST00000101158 471 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm4986-201ENSMUST00000119731 549 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm13350-201ENSMUST00000120519 479 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gm22058-201ENSMUST00000083393 310 ntBASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn8aQ9WTU3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm3961-201ENSMUST00000204425 994 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn8aQ9WTU3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.08□□□□□ -0.31
Scn8aQ9WTU3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn8aQ9WTU3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms