Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Atp6ap1Q9R1Q9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Atp6ap1Q9R1Q9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Atp6ap1Q9R1Q9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Atp6ap1Q9R1Q9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atp6ap1Q9R1Q9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atp6ap1Q9R1Q9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atp6ap1Q9R1Q9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.82□□□□□ -0.36
Atp6ap1Q9R1Q9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms