Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Gm8100-201ENSMUST00000182906 988 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Col4a4Q9QZR9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm12579-201ENSMUST00000118040 783 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm15703-201ENSMUST00000120250 880 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm37458-201ENSMUST00000194055 410 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm44958-201ENSMUST00000203734 736 ntBASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col4a4Q9QZR9 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm11354-201ENSMUST00000121974 422 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm43186-201ENSMUST00000198130 824 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm3619-201ENSMUST00000219947 775 ntBASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col4a4Q9QZR9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm23045-201ENSMUST00000175041 96 ntBASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm42518-201ENSMUST00000196277 938 ntBASIC12.77□□□□□ -0.36
Col4a4Q9QZR9 Gm2965-201ENSMUST00000198365 343 ntBASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms