Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Gm10268-201ENSMUST00000085340 555 ntBASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.1□□□□□ -0.15
Cpsf3Q9QXK7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gm23931-201ENSMUST00000103842 109 ntBASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
Cpsf3Q9QXK7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf3Q9QXK7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf3Q9QXK7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cpsf3Q9QXK7 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.08□□□□□ -0.16
Cpsf3Q9QXK7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms