Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm5161-201ENSMUST00000075243 853 ntBASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Sec61a2Q9JLR1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Mir874-201ENSMUST00000104769 76 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm15678-201ENSMUST00000117573 960 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm9794-201ENSMUST00000202370 423 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm19078-201ENSMUST00000206311 727 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm9908-201ENSMUST00000211534 448 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm7653-201ENSMUST00000214567 508 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm19220-201ENSMUST00000222682 803 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sec61a2Q9JLR1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sec61a2Q9JLR1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sec61a2Q9JLR1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Sec61a2Q9JLR1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm18018-201ENSMUST00000198273 408 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Gm24447-201ENSMUST00000083977 338 ntBASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sec61a2Q9JLR1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms