Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm5035-201ENSMUST00000215581 927 ntBASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubb3Q9ERD7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm4984-201ENSMUST00000115987 360 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm12485-201ENSMUST00000119641 291 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm15376-201ENSMUST00000122258 783 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm25857-201ENSMUST00000082788 129 ntBASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Tubb3Q9ERD7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gm15429-201ENSMUST00000151268 798 ntBASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gm26464-201ENSMUST00000157094 305 ntBASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubb3Q9ERD7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms