Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpne8Q9DC53 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpne8Q9DC53 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.67□□□□□ -0.22
Cpne8Q9DC53 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm5687-201ENSMUST00000118252 640 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm44397-201ENSMUST00000195950 113 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm45668-201ENSMUST00000211271 493 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpne8Q9DC53 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cpne8Q9DC53 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms