Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ssmem1Q9D9Y8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Gm13123-201ENSMUST00000122173 492 ntBASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Mir1982-201ENSMUST00000157368 74 ntBASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ssmem1Q9D9Y8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Ssmem1Q9D9Y8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ssmem1Q9D9Y8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm12384-201ENSMUST00000119228 919 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm13369-201ENSMUST00000119442 987 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm2231-201ENSMUST00000125661 612 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm19931-201ENSMUST00000198920 368 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ssmem1Q9D9Y8 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.32□□□□□ -0.6
Ssmem1Q9D9Y8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssmem1Q9D9Y8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ssmem1Q9D9Y8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms