Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mir874-201ENSMUST00000104769 76 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm25016-201ENSMUST00000158399 131 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pfdn1Q9CWM4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Gm12882-201ENSMUST00000121696 517 ntBASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pfdn1Q9CWM4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pfdn1Q9CWM4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.45□□□□□ -0.58
Pfdn1Q9CWM4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms