Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cldnd1Q9CQX5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm23363-201ENSMUST00000175024 79 ntBASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm38092-201ENSMUST00000195600 653 ntBASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm5051-201ENSMUST00000204085 485 ntBASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cldnd1Q9CQX5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm14665-201ENSMUST00000122294 557 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm17040-202ENSMUST00000170597 889 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Rprl1-202ENSMUST00000198476 238 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm45770-201ENSMUST00000212105 616 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cldnd1Q9CQX5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Cldnd1Q9CQX5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cldnd1Q9CQX5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cldnd1Q9CQX5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cldnd1Q9CQX5 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cldnd1Q9CQX5 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms