Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb1Q9CQ70 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb1Q9CQ70 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.77□□□□□ -0.69
H2afb1Q9CQ70 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
H2afb1Q9CQ70 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
H2afb1Q9CQ70 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gm14057-201ENSMUST00000120631 482 ntBASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H2afb1Q9CQ70 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm7730-201ENSMUST00000212486 454 ntBASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb1Q9CQ70 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms