Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Msh4Q99MT2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gm12928-201ENSMUST00000117115 573 ntBASIC12.79□□□□□ -0.36
Msh4Q99MT2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.79□□□□□ -0.36
Msh4Q99MT2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gm8463-201ENSMUST00000208573 613 ntBASIC12.79□□□□□ -0.36
Msh4Q99MT2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Msh4Q99MT2 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm17330-201ENSMUST00000221047 165 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.78□□□□□ -0.36
Msh4Q99MT2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Msh4Q99MT2 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.77□□□□□ -0.36
Msh4Q99MT2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Msh4Q99MT2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms