Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm38671-201ENSMUST00000200573 130 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm7287-201ENSMUST00000205267 602 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm16372-201ENSMUST00000073088 450 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tlr3Q99MB1 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.08□□□□□ -0.15
Tlr3Q99MB1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tlr3Q99MB1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm16202-201ENSMUST00000117532 544 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm13612-201ENSMUST00000119276 390 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm44069-201ENSMUST00000204898 506 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tlr3Q99MB1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tlr3Q99MB1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms