Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp1b1Q99LU0 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm19078-201ENSMUST00000206311 727 ntBASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm17330-201ENSMUST00000221047 165 ntBASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp1b1Q99LU0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Gm15376-201ENSMUST00000122258 783 ntBASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Gm37917-201ENSMUST00000194711 392 ntBASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.42□□□□□ -0.42
Chmp1b1Q99LU0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp1b1Q99LU0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms