Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.98□□□□□ -0.49
Lims1Q99JW4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 AC132863.2-201ENSMUST00000226643 799 ntBASIC11.98□□□□□ -0.49
Lims1Q99JW4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.98□□□□□ -0.49
Lims1Q99JW4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.97□□□□□ -0.49
Lims1Q99JW4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm11978-201ENSMUST00000122315 466 ntBASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm24694-201ENSMUST00000180054 110 ntBASIC11.97□□□□□ -0.49
Lims1Q99JW4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm27663-201ENSMUST00000184839 110 ntBASIC11.97□□□□□ -0.49
Lims1Q99JW4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lims1Q99JW4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm22189-201ENSMUST00000103822 86 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm14719-201ENSMUST00000121891 340 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Mir7684-201ENSMUST00000183858 60 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Mir8102-201ENSMUST00000184148 139 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gm26315-201ENSMUST00000083890 321 ntBASIC11.96□□□□□ -0.49
Lims1Q99JW4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lims1Q99JW4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms