Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Gm18212-201ENSMUST00000211678 889 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 Gm32025-201ENSMUST00000217960 307 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Acot6-202ENSMUST00000222921 3622 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.08■□□□□ 0
Rfc4Q99J62 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.08■□□□□ 0
Rfc4Q99J62 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Rfc4Q99J62 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.08■□□□□ 0
Rfc4Q99J62 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rfc4Q99J62 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.07■□□□□ 0
Rfc4Q99J62 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.07■□□□□ 0
Rfc4Q99J62 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm45186-201ENSMUST00000206874 478 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm13097-201ENSMUST00000210722 397 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15.07■□□□□ 0
Rfc4Q99J62 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.07■□□□□ 0
Rfc4Q99J62 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rfc4Q99J62 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.07■□□□□ 0
Rfc4Q99J62 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rfc4Q99J62 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.06■□□□□ 0
Rfc4Q99J62 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.06■□□□□ 0
Rfc4Q99J62 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rfc4Q99J62 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rfc4Q99J62 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rfc4Q99J62 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.06■□□□□ 0
Rfc4Q99J62 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.06■□□□□ 0
Rfc4Q99J62 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.06■□□□□ 0
Rfc4Q99J62 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.06■□□□□ 0
Rfc4Q99J62 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc4Q99J62 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms