Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.45■□□□□ 0.06
Col20a1Q923P0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.45■□□□□ 0.06
Col20a1Q923P0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.45■□□□□ 0.06
Col20a1Q923P0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Gm15370-201ENSMUST00000117158 253 ntBASIC15.44■□□□□ 0.06
Col20a1Q923P0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.44■□□□□ 0.06
Col20a1Q923P0 Gm38341-201ENSMUST00000195357 515 ntBASIC15.44■□□□□ 0.06
Col20a1Q923P0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col20a1Q923P0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm13350-201ENSMUST00000120519 479 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm6334-201ENSMUST00000207083 228 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm45865-201ENSMUST00000211815 945 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.43■□□□□ 0.06
Col20a1Q923P0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Col20a1Q923P0 Gm10434-201ENSMUST00000101158 471 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms