Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm22730-201ENSMUST00000158085 171 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm33112-201ENSMUST00000193971 699 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm43947-201ENSMUST00000203019 959 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm6290-201ENSMUST00000207666 1158 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm29794-201ENSMUST00000218919 1247 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 A1cf-203ENSMUST00000224400 1204 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr434-201ENSMUST00000076752 1056 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb20Q91XZ9 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm4806-201ENSMUST00000222704 1690 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15258-201ENSMUST00000153801 741 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm28911-201ENSMUST00000188837 117 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm21394-202ENSMUST00000189463 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm20806-202ENSMUST00000190349 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 AL645546.2-201ENSMUST00000224526 265 ntBASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb20Q91XZ9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15371-201ENSMUST00000117057 784 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm15770-201ENSMUST00000117498 584 ntBASIC13.12□□□□□ -0.31
Pcdhb20Q91XZ9 Gm12138-201ENSMUST00000122180 951 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms