Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb22Q91XZ8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb22Q91XZ8 Gm45251-201ENSMUST00000209486 1465 ntBASIC15.33■□□□□ 0.04
Pcdhb22Q91XZ8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhb22Q91XZ8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Gm10146-201ENSMUST00000072739 309 ntBASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhb22Q91XZ8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Gm16479-201ENSMUST00000121706 932 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Gm18187-201ENSMUST00000196476 984 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb22Q91XZ8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb22Q91XZ8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms