Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6649-201ENSMUST00000199743 1165 ntBASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gm44683-201ENSMUST00000209088 484 ntBASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.24□□□□□ -0.29
Pcdhb3Q91XZ7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm14539-201ENSMUST00000117527 174 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm44608-201ENSMUST00000206827 855 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb3Q91XZ7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb3Q91XZ7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms