Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhga11Q91XY8 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm12859-201ENSMUST00000117834 427 ntBASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm28760-201ENSMUST00000185995 736 ntBASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga11Q91XY8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Gm5354-201ENSMUST00000182417 973 ntBASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga11Q91XY8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga11Q91XY8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms