Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm12579-201ENSMUST00000118040 783 ntBASIC15.19■□□□□ 0.02
StrcQ8VIM6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Gm25072-201ENSMUST00000175233 235 ntBASIC15.19■□□□□ 0.02
StrcQ8VIM6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
StrcQ8VIM6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm11451-201ENSMUST00000118946 630 ntBASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm20392-201ENSMUST00000173047 701 ntBASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm23153-201ENSMUST00000175323 313 ntBASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm23771-201ENSMUST00000178702 110 ntBASIC15.18■□□□□ 0.02
StrcQ8VIM6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
StrcQ8VIM6 Gm12857-201ENSMUST00000117678 592 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm14724-201ENSMUST00000118400 537 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Rprl1-201ENSMUST00000158050 327 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm5852-201ENSMUST00000194119 1021 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm5542-201ENSMUST00000195485 1089 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm3793-201ENSMUST00000204973 672 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm16071-201ENSMUST00000119589 793 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm4726-201ENSMUST00000135604 736 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm6019-201ENSMUST00000148369 736 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm17826-201ENSMUST00000189720 798 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm9132-201ENSMUST00000210182 832 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Gm8325-201ENSMUST00000099086 453 ntBASIC15.17■□□□□ 0.02
StrcQ8VIM6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
StrcQ8VIM6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
StrcQ8VIM6 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms